2017 Publications from partner-units of the TULIP project.
Representative publications of 2017:
Badet T, Peyraud R, Mbengue M, Navaud O, Derbyshire M, Oliver RP, Barbacci A, Raffaele S. (2017) Codon optimization underpins generalist parasitism in fungi. eLife. DOI:10.7554/eLife.22472 |
Bestion, E., Jacob, S., Zinger, L., Di Gesu, L., Richard, M., White, J., & Cote, J. (2017). Climate warming reduces gut microbiota diversity in a vertebrate ectotherm. Nature Ecology & Evolution, 1(6), 0161 |
Camborde L, Jauneau A, Brière C, Deslandes L, Dumas B, Gaulin E (2017) Detection of nucleic acid – protein interactions in plant leaves using fluorescence lifetime imaging microscopy. Nature Protocols 12 : 1933–1950 |
Couzigou JM, Lauressergues D, André O, Gutjahr C, Guillotin B, Bécard G, Combier JP (2017) Positive Gene Regulation by a Natural Protective miRNA Enables Arbuscular Mycorrhizal Symbiosis. Cell Host Microbe. Dec 14. pii : S1931-3128(16)30490-5. doi : 10.1016/j.chom.2016.12.001 |
Irisarri I., Baurain D., Brinkmann H., Delsuc F., Sire J.Y., Kupfer A., Petersen J. … and Philippe H. (2017) Phylotranscriptomic consolidation of the jawed vertebrate timetree. Nature Ecology & Evolution. 1 (9), 1370 |
Isbell F., Gonzalez A., Loreau M., Cowles J., Díaz S., Hector A., Mace G.M., Wardle D.A., O’Connor M.I. Duffy J.E., Turnbull L.A., Thompson P.L. and Larigauderie A. (2017) Linking the influence and dependence of people on biodiversity across scales. Nature. 546, 65. |
Jacob S., Legrand D., Chaine A.S., Bonte D., Schtickzelle N., Huet M., Clobert J. (2017) Gene flow favours local adaptation under habitat choice. Nature Ecology and Evolution. 1: 1407–1410 |
Martin, F., Uroz, S., Barker, D. (2017). Ancestral alliances: Plant mutualistic symbioses with fungi and bacteria. Science, 356 (6340), 1-9. |
Saastamoinen, M., Bocedi, G., Cote, J., Legrand, D., Guillaume, F., Wheat, C. W., … del Mar Delgado, M. (2017). Genetics of dispersal: Genetic of dispersal. Biological Reviews. DOI:10.1111/brv.12356 |
2017 publications list:
Acker, P., Besnard, A., Monnat, J.-Y., & Cam, E. (2017). Breeding habitat selection across spatial scales: is grass always greener on the other side? Ecology, 98(10), 2684–2697.
Ali, N., Tavoillot, J., Besnard, G., Khadari, B., Dmowska, E., Winiszewska, G., … Mateille, T. (2017). How anthropogenic changes may affect soil-borne parasite diversity? Plant-parasitic nematode communities associated with olive trees in Morocco as a case study. BMC Ecology, 17(4)
Aoun, N., Tauleigne, L., lonjon, F., Deslandes, L., Vailleau, F., ROUX, F., Berthomé, R. (2017). Quantitative Disease Resistance under Elevated Temperature: Genetic Basis of New Resistance Mechanisms to Ralstonia solanacearum. Frontiers in Plant Science, 8, 1-16
Arnaiz, O., Van Dijk, E., Betermier, M., Lhuillier-Akakpo, M., de Vanssay, A., Duharcourt, S., Sallet, E., Gouzy, J., Sperling, L. (2017). Improved methods and resources for paramecium genomics: transcription units, gene annotation and gene expression. BMC Genomics, 18, 1-12
Arnoldi J.-F., Bideault A., Loreau M. and Haegeman B. (2017) How ecosystems recover from pulse perturbations: A theory of short- to long-term responses. Journal of Theoretical Biology. 436 (2018) 79–92.
Astudillo C., Jompa J., Glasi B., Bell J., Webster N., Montoya J.M. and Taylor M. (2017) Evaluating the core microbiota in complex communities: a systematic investigation. Environmental Microbiology. 19, 1450-1462.
Aubret F., Bignon F., Bouffet-Halle A., Blanvillain G., Kok P.J.R & Souchet J. (2017) Yolk removal generates hatching asynchrony in snake eggs. Scientific Reports. 7
Authier, M., Aubry, L. M., & Cam, E. (2017). Wolf in sheep’s clothing: Model misspecification undermines tests of the neutral theory for life histories. Ecology and Evolution, 7(10), 3348–3361
Badet T, Voisin D, Mbengue M, Barascud M, Sucher J, Sadon P, Balagué C, Roby D, Raffaele S. (2017) Parallel evolution of the POQR prolyl oligo peptidase gene conferring plant quantitative disease resistance. PLoS Genet. 13(12):e1007143.
Badet, T., Peyraud, R., Mbengue, M., Navaud, O., Derbyshire, M., Oliver, Barbacci, A., Raffaele, S. (Auteur de correspondance) (2017). Codon optimization underpins generalist parasitism in fungi. eLife , 6, 35 p.
Badouin, H., Gladieux, P., Gouzy, J., Siguenza, S., Aguileta, G., Snirc, A., Le Prieur, S., Jeziorski, C., Branca, A., Giraud, T. (2017). Widespread selective sweeps throughout the genome of model plant pathogenic fungi and identification of effector candidates. Molecular Ecology, 26 (7).
Badouin, H., Gouzy, J., Grassa, C., Murat, F., Staton, S. E., Cottret, L., Lelandais-briere, C., Owens, GL., Carrere, S., mayjonade, B., Legrand, L., Gill, N., Kane, N. C., Bowers, J. E., Hubner, S., Bellec, A., Berard, A., Berges, H., Blanchet, N., Boniface, M.-C., Brunel, D., Catrice, O., Chaidir, N., Claudel, C., Donnadieu, C., Faraut, T., Fievet, G., Helmstetter, N., King, M., Knapp, S. J., Lai, Z., Le Paslier, M.-C., Lippi, Y., Lorenzon, L., Mandel, J. R., Marage, G., Marchand, G., Marquand, E., Bret Mestries, E., Morien, E., Nambeesan, S., Nguyen, T., Pegot - Espagnet, P., Pouilly, N., Raftis, F., Sallet, E., Schiex, T., Thomas, J., Vandecasteele, C., Vares, D., Vear, F., Vautrin, S., Crespi, M., Mangin, B., Burke, JM., Salse, J., Munos, S., Vincourt, P., Rieseberg, L. H., Langlade, N. (2017). The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution. Nature, 546 (7656), 148-152.
Baguette B., Michniewicz R. and Stevens V.M. (2017) From genes to metapopulations. Nature Ecology & Evolution. 1, 0130. DOI:10.1038/s41559-017-0130
Balagué C, Gouget A, Bouchez O, Souriac C, Haget N, Boutet-Mercey S, Govers F, Roby D, Canut H (2017) The Arabidopsis thaliana lectin receptor kinase LecRK-I.9 is required for full resistance to Pseudomonas syringae and affects jasmonate signalling. Mol Plant Pathol 18: 937-948
Barker, D., Chabaud, M., Russo, G., Genre, A. (2017). Nuclear Ca2+ signalling in arbuscular mycorrhizal and actinorhizal endosymbioses: on the trail of novel underground signals. New Phytologist, 214 (2), 533-538
Bécard G (2017) How Plants Communicate with their Biotic Environment, Advances in Botanical Research, Vol 82, 1st Edition, Academic Press, 404 pages
Bécard G, Guidi L, Alizon S, Angelier F, Bezin L, Bowler C, Courchamp F, Dutreuil S, Faure M, Hibner U, Jebbar M, Kaltz O, Leulier F, Loudet O, Simonet P, Tost J, Vergnolle N (2017) L’être vivant dans son environnement, in "Étonnant vivant - Découvertes et promesses du XXIe siècle", C. Jessus & T. Gaude (Eds.), CNRS Edition, 328 pages
Beldade, P., & Peralta, C. M. (2017). Developmental and evolutionary mechanisms shaping butterfly eyespots. Current Opinion in Insect Science, 19, 22–29.
Bellande K, Bono JJ, Savelli B, Jamet E, Canut H (2017) Plant lectins and lectin receptor-like kinases: How do they sense the outside? Int J Mol Sci 18: 1164
Berthelot, N., Brossay, A., Gasciolli, V., Bono, J.-J., Baron, A., Beau, J.-M., Urban, D., Boyer, F., Vauzeilles, B. (2017). Synthesis of lipo-chitooligosaccharide analogues and their interaction with LYR3, a high affinity binding protein for Nod factors and Myc-LCOs. Organic and Biomolecular Chemistry, 15 (37), 7802-7812.
Bertrand R. (2017) Unequal contributions of species′ persistence and migration on plant communities′ response to climate warming throughout forests. bioRxiv. 10.1101/217497
Besnard, G., Terral, J.-F., & Cornille, A. (2017). On the origins and domestication of the olive: a review and perspectives. Annals of Botany 121(3), 385–403.
Bestion E., Jacob S., Zinger L., Di Gesu L., Richard M., White J. and Cote J. (2017) Climate warming reduces gut microbiota diversity in a vertebrate ectotherm. Nature Ecology & Evolution. DOI: 10.1038/s41559-017-0161
Birer, C., Tysklind, N., Zinger, L., & Duplais, C. (2017). Comparative analysis of DNA extraction methods to study the body surface microbiota of insects: A case study with ant cuticular bacteria. Molecular Ecology Resources, 17(6), e34–e45
Blanchard, P., Pays, O., & Fritz, H. (2017). Ticks or lions: trading between allogrooming and vigilance in maternal care. Animal Behaviour, 129, 269–279.
Blanchet S., Prunier J.G., and De Kort H. (2017) Time to go bigger: emerging patterns in macro-genetics. Trends in Genetics. 33: 579-580
Blanc-Mathieu, R., Perfus-Barbeoch, L., Aury, J.-M., Da Rocha, M., Gouzy, J., Sallet, E., Martin Jimenez, C., Bailly-Bechet, M., Castagnone-Sereno, P., Flot, J.-F., kozlowski, D., Cazareth, J., Couloux, A., Da Silva, C., Guy, Kim-Jo, Y. J., Rancurel, C., Schiex, T., Abad, P., Wincker, P., Danchin, E. (2017). Hybridization and polyploidy enable genomic plasticity without sex in the most devastating plant-parasitic nematodes. Plos Genetics, 13 (6), e1006777.
Bordat, A., Marchand, G., Langlade, N., Pouilly, N., Munos, S., Dechamp-Guillaume, G., Vincourt, P., Bret-Mestries, E. (2017). Different genetic architectures underlie crop responses to the same pathogen: the {Helianthus annuus * Phoma macdonaldii} interaction case for black stem disease and premature ripening. BMC Plant Biology, 17 (1), 167-167
Bourgeois, Y. X. C., Delahaie, B., Gautier, M., Lhuillier, E., Malé, P.-J. G., Bertrand, J. A. M., … Thébaud, C. (2017). A novel locus on chromosome 1 underlies the evolution of a melanic plumage polymorphism in a wild songbird. Royal Society Open Science, 4(2), 160805.
Boutin, M., Corcket, E., Alard, D., Villar, L., Jiménez, J.-J., Blaix, C., … Pornon, A. (2017). Nitrogen deposition and climate change have increased vascular plant species richness and altered the composition of grazed subalpine grasslands. Journal of Ecology, 105(5), 1199–1209
Branco, S., Badouin, H., de la Vega, R. C. R., Gouzy, J., Carpentier, F., Aguileta, G., Siguenza, S., Brandenburg, J. T., Coelho, M. A., Hood, M. E., Giraud, T. (2017). Evolutionary strata on young mating-type chromosomes despite the lack of sexual antagonism. Proceedings of the National Academy of Sciences of the United States of America, 114 (27), 7067-7072
Brendolise, C., Montefiori, M., Dinis, R., Peeters, N., Storey, R. D., Rikkerink, E. H. (2017). A novel hairpin library-based approach to identify NBS-LRR genes required for effector-triggered hypersensitive response in Nicotiana benthamiana. Plant Methods, 13, 1-10.
Bücherl CA, Jarsch IK, Schudoma C, Segonzac C, Mbengue M, Robatzek S, MacLean D, Ott T, Zipfel C.(2017) Plant immune and growth receptors share common signalling components but localise to distinct plasma membrane nanodomains. Elife. 6. pii: e25114.
Calcagno V., Jarne P., Loreau M., Mouquet N. and David P. (2017) Diversity spurs diversification in ecological communities. Nature Communications. 8, 15810.
Calcagno, V., Mitoyen, C., Audiot, P., Ponsard, S., Gao, G.-Z., Lu, Z.-Z., … Bourguet, D. (2017). Parallel evolution of behaviour during independent host-shifts following maize introduction into Asia and Europe. Evolutionary Applications.
Camborde L, Jauneau A, Brière C, Deslandes L, Dumas B, Gaulin E (2017) Detection of nucleic acid – protein interactions in plant leaves using fluorescence lifetime imaging microscopy. Nature Protocols 12: 1933–1950
Capela, D., Marchetti, M., Clerissi, C., Perrier, A., guetta, D., Gris, C., Valls, M., Jauneau, A., Cruveiller, S., Rocha, E. P. C., Masson-Boivin, C. (2017). Recruitment of a Lineage-Specific Virulence Regulatory Pathway Promotes Intracellular Infection by a Plant Pathogen Experimentally Evolved into a Legume Symbiont. Molecular Biology and Evolution, 34 (10), 2503-2521
Carotenuto, G., Chabaud, M., Miyata, K., Capozzi, M., Takeda, N., Kaku, H., Shibuya, N., Nakagawa, T., Barker, D., Genre, A (2017). The rice LysM receptor-like kinase OsCERK1 is required for the perception of short-chain chitin oligomers in arbuscular mycorrhizal signaling. New Phytologist, 214 (4), 1440-1446.
Carrere, S., Gouzy, J. (2017). myGenomeBrowser: building and sharing your own genome browser. Bioinformatics, 33 (8), 1255-1257.
Carrié R., Andrieu E., Cunningham S.A., Lentini P.E., Loreau M. and Ouin A. (2017) Relationships among ecological traits of wild bee communities along gradients of habitat amount and fragmentation. Ecography. 40, 85–97.
Carvajal-Quintero, J. D., Januchowski-Hartley, S. R., Maldonado-Ocampo, J. A., Jézéquel, C., Delgado, J., & Tedesco, P. A. (2017). Damming Fragments Species’ Ranges and Heightens Extinction Risk: Damming increases fish extinction risk. Conservation Letters. 10, 708-716.
Cauchoix M., Hermer E., Chaine A.S., Morand-Ferron J. (2017) Cognition in the field: comparison of reversal learning performance in captive and wild passerines. Scientific Reports. 7: 12945.
Cerri, M. R., Wang, Q., Stolz, P., Folgmann, J., Frances, L., Katzer, K., Li, X., Heckmann, A. B., Wang, TL., Downie, JA., Klingl, A., de Carvalho-Niebel, F., Xie, F., Parniske, M (2017). The ERN1 transcription factor gene is a target of the CCaMK/CYCLOPS complex and controls rhizobial infection in Lotus japonicus. New Phytologist, 215 (1), 323-337
Cerutti, A., Jauneau, A., Auriac, MC., Lauber, E., Martinez, Y., Chiarenza, S., Leonhardt, N., Berthomé, R., Noel, L. (2017). Immunity at cauliflower hydathodes controls systemic infection by xanthomonas campestris pv campestris. Plant Physiology, 174 (2), 700-716
Chan, B., Ngor, P. B., So, N., & Lek, S. (2017). Spatial and temporal changes in fish yields and fish communities in the largest tropical floodplain lake in Asia. Annales de Limnologie - International Journal of Limnology, 53, 485–493.
Charru M., Seynave I., Hervé J-C., Bertrand R. and Bontemps J-D. (2017) Recent growth changes in Western European forests are driven by climate warming and structured across tree species climatic habitats. Annals of Forest Science. 74, 1-34.
Chatelain, M., Pessato, A., Frantz, A., Gasparini, J., & Leclaire, S. (2017). Do trace metals influence visual signals? Effects of trace metals on iridescent and melanic feather colouration in the feral pigeon. Oikos, 126(11), 1542–1553
Chazalviel, M., Frainay, C., Poupin, N., Vinson, F., Merlet, B., Gloaguen, B., Cottret, L., Jourdan, F. (Auteur de correspondance) (2017). MetExploreViz: web component for interactive metabolic network visualization. Bioinformatics.
Chea, R., Lek, S., Ngor, P., & Grenouillet, G. (2017). Large-scale patterns of fish diversity and assemblage structure in the longest tropical river in Asia. Ecology of Freshwater Fish, 26(4), 575–585
Chen E, Morin E, Beaudet D, Noel J, Yildirir G, Ndikumana S, Charron P, Stonge C, Giorgi J, Kruger M, Marton T, Ropars J, Grigoriex IV, Hainaut M, Henrissat B, Roux C, Martin F & Corradi N. (2018). High intraspecific genome diversity in the model arbuscular mycorrhizal symbiont Rhizophagus irregularis. New Phytol. DOI:10.1111/nph.14989
Cheval C, Perez M, Leba LJ, Ranty B, Perochon A, Reichelt M, Mithöfer A, Robe E, Mazars C, Galaud JP, Aldon D.(2017) PRR2, a pseudo-response regulator, promotes salicylic acid and camalexin accumulation during plant immunity. Sci Rep. 7(1):6979
Cicconardi, F., Borges, P. A. V., Strasberg, D., Oromí, P., López, H., Pérez-Delgado, A. J., … Emerson, B. C. (2017). MtDNA metagenomics reveals large-scale invasion of belowground arthropod communities by introduced species. Molecular Ecology, 26(12), 3104–3115.
Cilleros, K., Allard, L., Vigouroux, R., & Brosse, S. (2017). Disentangling spatial and environmental determinants of fish species richness and assemblage structure in Neotropical rainforest streams. Freshwater Biology, 62(10), 1707–1720.
Clément, Y., Sarah, G., Holtz, Y., Homa, F., Pointet, S., Contreras, S., … Glémin, S. (2017). Evolutionary forces affecting synonymous variations in plant genomes. PLOS Genetics, 13(5), e1006799.
Cordero G.A., Andersson B.A., Souchet J., Micheli G., Noble D.W.A., Gangloff E.J., Uller* T. , Aubret* F. (2018) Physiological plasticity in lizard embryos exposed to high-altitude hypoxia. Journal of Experimental Zoology. Part A, In press. *shared senior authorship.
Cote J., Bestion E., Jacob S., Travis J., Legrand D. and Baguette M. (2017) Evolution of dispersal strategies and dispersal syndromes in fragmented landscapes. Ecography. 40, 56-73
Cote, J., Bocedi, G., Debeffe, L., Chudzińska, M. E., Weigang, H. C., Dytham, C., … Hewison, A. J. M. (2017). Behavioural synchronization of large-scale animal movements - disperse alone, but migrate together?: Synchronization of large-scale animal movements. Biological Reviews, 92(3), 1275–1296
Cote, J., Brodin, T., Fogarty, S., & Sih, A. (2017). Non-random dispersal mediates invader impacts on the invertebrate community. Journal of Animal Ecology, 86(6), 1298–1307.
Couzigou JM, Lauressergues D, André O, Gutjahr C, Guillotin B, Bécard G, Combier JP (2017) Positive Gene Regulation by a Natural Protective miRNA Enables Arbuscular Mycorrhizal Symbiosis. Cell Host Microbe. Dec 14. pii: S1931-3128(16)30490-5. doi: 10.1016/j.chom.2016.12.001
Cucherousset, J., Horky, P., Slavík, O., Ovidio, M., Arlinghaus, R., Boulêtreau, S., … Santoul, F. (2017). Ecology, behaviour and management of the European catfish. Reviews in Fish Biology and Fisheries.
Daccord, N., Celton, J.-M., Linsmith, G., Becker, C., Choisne, N., Schijlen, E., van de Geest, H., Bianco, L., Micheletti, D., Velasco, R., Di Pierro, E. A., Gouzy, J., Rees, D. J. G., Guérif, P., Muranty, H., Durel, C. E., Laurens, F., Lespinasse, Y., Gaillard, S., Aubourg, S., Quesneville, H., Weigel, D., van de Weg, E., Troggio, M., Bucher, E. (2017). High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development. Nature Genetics, 49 (7), 1099-1108
Datry, T., Vander Vorste, R., Goïtia, E., Moya, N., Campero, M., Rodriguez, F., … Oberdorff, T. (2017). Context-dependent resistance of freshwater invertebrate communities to drying. Ecology and Evolution, 7(9), 3201–3211.
Daubech, B., Remigi, P., Doin De Moura, G. G., Marchetti, M., Pouzet, C., Auriac, M.-C., Gokhale, C. S., Masson-Boivin, C., Capela, D. (2017). Spatio-temporal control of mutualism in legumes helps spread symbiotic nitrogen fixation. eLife, 6
De Crop, E., Nuytinck, J., Van de Putte, K., Wisitrassameewong, K., Hackel, J., Stubbe, D., … Verbeken, A. (2017). A multi-gene phylogeny of Lactifluus (Basidiomycota, Russulales) translated into a new infrageneric classification of the genus Persoonia - Persoonia: Molecular Phylogeny and Evolution of Fungi, 38(1), 58–80.
de la Estrella, M., Forest, F., Wieringa, J. J., Fougère-Danezan, M., & Bruneau, A. (2017). Insights on the evolutionary origin of Detarioideae, a clade of ecologically dominant tropical African trees. New Phytologist, 214(4), 1722–1735
Debaeke, P. (Auteur de correspondance), Casadebaig, P., Flénet, F., Langlade, N. (2017). Sunflower crop and climate change: vulnerability, adaptation, and mitigation potential from case-studies in Europe. OCL Oilseeds and Fats Crops and Lipids, 24 (1), 15 p
Delahaie, B., Cornuault, J., Masson, C., Bertrand, J. A. M., Bourgeois, Y. X. C., Milá, B., & Thébaud, C. (2017). Narrow hybrid zones in spite of very low population differentiation in neutral markers in an island bird species complex. Journal of Evolutionary Biology, 30(12), 2132–2145
Delsol R., Loreau M. and Haegeman B. (2018) The relationship between the spatial scaling of biodiversity and ecosystem stability. Global Ecology and Biogeography. (in press).
Delsuc F., Philippe H., Tsagkogeorga G., Simion P., Tilak M.K. and Turon X. (2017) A phylogenomic framework and timescale for comparative genomics and evolutionary developmental biology of tunicates. bioRxiv. 236448
Derbyshire M, Denton-Giles M, Hegedus D, Seifbarghy S, Rollins J, van Kan J, Seidl MF, Faino L, Mbengue M, Navaud O, Raffaele S, Hammond-Kosack K, Heard S, Oliver R.(2017) The complete genome sequence of the phytopathogenic fungus Sclerotinia sclerotiorum reveals insights into the genome architecture of broad host range pathogens. Genome Biol Evol. doi: 10.1093/gbe/evx030.
Dias, M. S., Tedesco, P. A., Hugueny, B., Jézéquel, C., Beauchard, O., Brosse, S., & Oberdorff, T. (2017). Anthropogenic stressors and riverine fish extinctions. Ecological Indicators, 79, 37–46
Ding, C., Jiang, X., Xie, Z., & Brosse, S. (2017). Seventy-five years of biodiversity decline of fish assemblages in Chinese isolated plateau lakes: widespread introductions and extirpations of narrow endemics lead to regional loss of dissimilarity. Diversity and Distributions, 23(2), 171–184
Dissmeyer, N., Rivas, S., Graciet, E. (2017). Life and death of proteins after protease cleavage: protein degradation by the N-end rule pathway. New Phytologist, 1-7
Ducatez, S., Giraudeau, M., Thébaud, C., & Jacquin, L. (2017). Colour polymorphism is associated with lower extinction risk in birds. Global Change Biology, 23(8), 3030–3039.
Duhnen, A., Gras, A., Teyssèdre , S., Romestant, M., Claustres, B., Dayde, J., Mangin, B. (2017). Genomic Selection for Yield and Seed Protein Content in Soybean: A Study of Breeding Program Data and Assessment of Prediction Accuracy. Crop Science, 57 (3), 1325-1337
Duhoux, A., Carrere, S., Duhoux, A., Délye, C. (2017). Transcriptional markers enable identification of rye-grass (Lolium sp.) plants with non-target -site-based resistance to herbicides inhibiting acetolactate-synthase. Plant Science, 257, 22-36.
Duneau, D. F., Kondolf, H. C., Im, J. H., Ortiz, G. A., Chow, C., Fox, M. A., … Lazzaro, B. P. (2017). The Toll pathway underlies host sexual dimorphism in resistance to both Gram-negative and Gram-positive bacteria in mated Drosophila. BMC Biology, 15(1).
Duneau, D., Ferdy, J.B., Revah, J., Kondolf, H., Ortiz, G.A., Lazzaro, B.P. & Buchon, N. (2017a) Stochastic variation in the initial phase of bacterial infection predicts the probability of survival in D. melanogaster. eLife, 6.
Dunning, L. T., Liabot, A.-L., Olofsson, J. K., Smith, E. K., Vorontsova, M. S., Besnard, G., … Lehmann, C. E. R. (2017). The recent and rapid spread of Themeda triandra. Botany Letters,
Dupuy, P., Gourion, B., Sauviac, L., Bruand, C. (2017). DNA double-strand break repair is involved in desiccation resistance of Sinorhizobium meliloti, but is not essential for its symbiotic interaction with Medicago truncatula. Microbiology (Reading), 163 (3), 333-342.
Duruflé H, Hervé V, Balliau T, Zivy M, Dunand C, Jamet E (2017) Proline hydroxylation in cell wall proteins: is it yet possible to define rules? Front Plant Sci 8: 1802
Emerson, B. C., Casquet, J., López, H., Cardoso, P., Borges, P. A. V., Mollaret, N., … Thébaud, C. (2017). A combined field survey and molecular identification protocol for comparing forest arthropod biodiversity across spatial scales. Molecular Ecology Resources, 17(4), 694–707.
Erill, I., Puigvert, M., Legrand, L., Guarischi-Sousa, R., Vandecasteele, C., Setubal, J. C., Genin, S., Guidot, A., Valls, M. (2017). Comparative Analysis of Ralstonia solanacearum Methylomes. Frontiers in Plant Science, 8, 1-16.
Evangelista, C., Lecerf, A., Britton, J. R., & Cucherousset, J. (2017). Resource composition mediates the effects of intraspecific variability in nutrient recycling on ecosystem processes. Oikos, 126(10), 1439–1450
Feuda R., Dohrmann M., Pett W., Philippe H., Rota-Stabelli O. and Lartillot N. (2017) Improved Modeling of Compositional Heterogeneity Supports Sponges as Sister to All Other Animals. Current Biology. 27 (24), 3864-3870. e4
Filipsson, K., Brijs, J., Näslund, J., Wengström, N., Adamsson, M., Závorka, L., … Höjesjö, J. (2017). Encystment of parasitic freshwater pearl mussel (Margaritifera margaritifera) larvae coincides with increased metabolic rate and haematocrit in juvenile brown trout (Salmo trutta). Parasitology Research, 116(4), 1353–1360
Frachon, L., Libourel, C., Villoutreix, R., Carrere, S., Glorieux, C., Huard-Chauveau, C., De Navascues Melero, M., Gay, L., Vitalis, R., Baron, E., Amsellem, L., Bouchez, O., Vidal, M., Le Corre, V., Roby, D., Bergelson, J., Roux, F. (2017). Intermediate degrees of synergistic pleiotropy drive adaptive evolution in ecological time. Nature Ecology and Evolution, 1 (10), 1551-1561
Gamas, P., Brault, M., Jardinaud, M.-F., Frugier, F. (2017). Cytokinins in Symbiotic Nodulation: When, Where, What For?. Trends in Plant Science, 22 (9), 792-802
Gascuel, Q. (Auteur de correspondance), Diretto, G., Monforte, A. J., Fortes, A. M., Granell, A. (Auteur de correspondance) (2017). Use of Natural Diversity and Biotechnology to Increase the Quality and Nutritional Content of Tomato and Grape. Frontiers in Plant Science, 8, 1-24
Gasparini, J., Dauphin, L., Favreliere, J., Frantz, A., Jacquin, L., Recapet, C., & Prevot, A.-C. (2017). Effects of confinement on body mass and site fidelity of feral pigeons during the setting-up of pigeon houses. BioRxiv
Gaulin E. (2017) Effector-mediated communication of filamentous plant pathogens with their hosts. Adv Bot Res 82:161-185
Ghorbel M, Cotelle V, Ebel C, Zaidi I, Ormancey M, Galaud JP, Hanin M. (2017) Regulation of the wheat MAP kinase phosphatase 1 by 14-3-3 proteins. Plant Sci.257:37-47
Gimenez, O., Cam, E., & Gaillard, J.-M. (2017). Individual heterogeneity and capture-recapture models: what, why and how? Oikos.
GóMez-Moracho, T., Heeb, P., & Lihoreau, M. (2017). Effects of parasites and pathogens on bee cognition: Bee parasites, pathogens and cognition. Ecological Entomology, 42, 51–64.
Grau, O., Peñuelas, J., Ferry, B., Freycon, V., Blanc, L., Desprez, M., … Hérault, B. (2017). Nutrient-cycling mechanisms other than the direct absorption from soil may control forest structure and dynamics in poor Amazonian soils. Scientific Reports, 7, 45017.
Gronnier, J., Crowet, J. M., Habenstein, B., Nasir, M. N., Bayle, V., Hosy, E., Platre, M. P., Gouguet, P., Raffaele, S., Martinez, D., Grelard, A., Loquet, A., Simon-Plas, F., Gerbeau-Pissot, P., Der, C., Bayer, E. M., Jaillais, Y., Deleu, M., Germain, V., Lins, L., Mongrand, S. (2017). Structural basis for plant plasma membrane protein dynamics and organization into functional nanodomains. eLife , 6.
Gryta, H., Van de Paer, C., Manzi, S., Holota, H., Roy, M., & Besnard, G. (2017). Genome skimming and plastid microsatellite profiling of alder trees (Alnus spp., Betulaceae): phylogenetic and phylogeographical prospects. Tree Genetics & Genomes, 13(6).
Guillaumot, D., Lopez Obando, M., Baudry, K., Avon, A., Rigaill, G., de Longevialle, A. F., Broche, B., Takenaka, M., Berthomé, R., De Jaeger, G., Delannoy, E., Lurin, C. (Auteur de correspondance) (2017). Two interacting PPR proteins are major Arabidopsis editing factors in plastid and mitochondria. Proceedings of the National Academy of Sciences of the United States of America, 114 (33), 8877-8882. ,
Guillerault, N., Bouletreau, S., Iribar, A., Valentini, A., & Santoul, F. (2017). Application of DNA metabarcoding on faeces to identify European catfish Silurus glanis diet: dna metabarcoding of s. glanis faeces. Journal of Fish Biology, 90(5), 2214–2219.
Guillotin B and Etemadi-Shalamzari M and Audran-Delalande C and Bouzayen M and Bécard G and Combier JP (2017) Sl-IAA27 regulates strigolactone biosynthesis and mycorrhization in tomato (var. MicroTom). New Phytologist, vol. 213 (n° 3). pp. 1124-1132. ISSN 0028-646X.
Guo, Z., Liu, J., Lek, S., Li, Z., Zhu, F., Tang, J., … Cucherousset, J. (2017). Coexisting invasive gobies reveal no evidence for temporal and trophic niche differentiation in the sublittoral habitat of Lake Erhai, China. Ecology of Freshwater Fish, 26, 42–52.
Haddad N.M., Holt R.D., Fletcher R. J., Loreau M. and Clobert J. (2017) Connecting models, data, and concepts to understand fragmentation’s ecosystem-wide effects. Ecography. 40, 1–8.
Hansen, D. M., Austin, J. J., Baxter, R. H., de Boer, E. J., Falcón, W., Norder, S. J., … Warren, B. H. (2017). Origins of endemic island tortoises in the western Indian Ocean: a critique of the human-translocation hypothesis. Journal of Biogeography, 44(6), 1430–1435.
Henry, E., Toruno, T. Y., Jauneau, A., Deslandes, L., Coaker, G. (2017). Direct and Indirect Visualization of Bacterial Effector Delivery into Diverse Plant Cell Types during Infection. Plant Cell, 29 (7), 1555-1570
Hérivaux A, de Bernonville TD, Roux C, Clastre M, Courdavault V, Gastebois A, ... & Papon N (2017) The Identification of Phytohormone Receptor Homologs in Early Diverging Fungi Suggests a Role for Plant Sensing in Land Colonization by Fungi. mBio, 8(1), e01739-16
Hermoso, V., Januchowski-Hartley, S. R., Linke, S., Dudgeon, D., Petry, P., & McIntyre, P. (2017). Optimal allocation of Red List assessments to guide conservation of biodiversity in a rapidly changing world. Global Change Biology, 23(9), 3525–3532.
Herrbach, V., Chirinos, X. F., Rengel, D., Agbevenou, K., Vincent, R., Pateyron, S., Huguet, S., Balzergue, S., Pasha, A., Provart, N., Gough, C., Bensmihen, S. (2017). Nod factors potentiate auxin signaling for transcriptional regulation and lateral root formation in Medicago truncatula. Journal of Experimental Botany, 68 (3), 568-582
Huang B, Routaboul JM, Liu M, Deng W, Maza E, Mila I, Hu G, Zouine M, Frasse P, Vrebalov JT, Giovannoni J, Li Z, Van der Rest B and Bouzayen M. (2017) Overexpression of the class D MADS-box gene Sl-AGL11 impacts fleshy tissue differentiation and structure in tomato fruits J Exp Bot.2017 sep 14 doi:10,1093/jxb/erx303.
Ibanez, T., Chave, J., Barrabé, L., Elodie, B., Boutreux, T., Trueba, S., … Birnbaum, P. (2017). Community variation in wood density along a bioclimatic gradient on a hyper-diverse tropical island. Journal of Vegetation Science, 28(1), 19–33
Irisarri I., Baurain D., Brinkmann H., Delsuc F., Sire J.Y., Kupfer A., Petersen J. … and Philippe H. (2017) Phylotranscriptomic consolidation of the jawed vertebrate timetree. Nature ecology & evolution. 1 (9), 1370
Isbell F., Gonzalez A., Loreau M., Cowles J., Díaz S., Hector A., Mace G.M., Wardle D.A., O’Connor M.I. Duffy J.E., Turnbull L.A., Thompson P.L. and Larigauderie A. (2017) Linking the influence and dependence of people on biodiversity across scales. Nature. 546, 65.
Islam, F., Wang, J., Farooq, M. A., Khan, M. S. S., Xu, L., Zhu, J., Zhao, M., Munos, S., Li, Q. X., Zhou, W. (2017). Potential impact of the herbicide 2,4-dichlorophenoxyacetic acid on human and ecosystems. Environment International, In press.
Isselin-Nondedeu, F., Trochet, A., Joubin, T., Picard, D., Etienne, R., Chevalier, H. L., … Ribéron, A. (2017). Spatial genetic structure of Lissotriton helveticus L. following the restoration of a forest ponds network. Conservation Genetics, 18(4), 853–866.
Jackson, M. C., Evangelista, C., Zhao, T., Lecerf, A., Britton, J. R., & Cucherousset, J. (2017). Between-lake variation in the trophic ecology of an invasive crayfish. Freshwater Biology, 62(9), 1501–1510
Jacob S, Parthuisot N, Vallat A, Ramon-Portugal F, Helfenstein F, Heeb P (2015) Microbiome affects egg carotenoid investment, nestling development and adult oxidative costs of reproduction in Great tits. Functional Ecology. 29, 1048-1058.
Jacob S., Legrand D., Chaine A.S., Bonte D., Schtickzelle N., Huet M., Clobert J. (2017) Gene flow favours local adaptation under habitat choice. Nature Ecology and Evolution. 1: 1407–1410.
Jacq A, Pernot C, Martinez Y, Domergue F, Payré B, Jamet E, Burlat V, Pacquit V (2017) The Arabidopsis Lipid Transfer Protein 2 (AtLTP2) is involved in cuticle-cell wall interface integrity and in etiolated hypocotyl permeability. Front Plant Sci 8: 263
Jacquin, L., Dybwad, C., Rolhausen, G., Hendry, A., & Reader, S. (2017). Evolutionary and immediate effects of crude oil pollution on exploration behaviour in Trinidadian guppies. Animal Cognition, 20, 97–108.
Jacquin, L., Gauthey, Z., Roussille, V., Le Hénaff, M., Tentelier, C., Labonne, J., & Fitzpatrick, J. (2017). Melanin in a changing world: brown trout coloration reflects alternative reproductive strategies in variable environments. Behavioral Ecology, 28(6), 1423–1434.
Jaillard B., Richon C., Deleporte P., Loreau M. and Violle C. (2018) An a posteriori species clustering for quantifying the effects of species interactions on ecosystem functioning. Methods in Ecology and Evolution. (in press).
Januchowski-Hartley, S. R., Selkoe, K. A., Gallo, N. D., Bird, C. E., & Hogan, J. D. (2017). Knowledge sharing about deep-sea ecosystems to inform conservation and research decisions. Facets, 2(2), 984–997.
Joetzjer, E., Pillet, M., Ciais, P., Barbier, N., Chave, J., Schlund, M., … Poulter, B. (2017). Assimilating satellite-based canopy height within an ecosystem model to estimate aboveground forest biomass: Assimilating Canopy Height Into Biomass. Geophysical Research Letters, 44(13), 6823–6832
Josserand, R., Dupoué, A., Agostini, S., Haussy, C., Le Galliard, J.-F., Meylan, S. (Auteur de correspondance) (2017). Habitat degradation increases stress-hormone levels during the breeding season, and decreases survival and reproduction in adult common lizards. Oecologia, 184 (1), 75-86.
Jucker, T., Caspersen, J., Chave, J., Antin, C., Barbier, N., Bongers, F., … Coomes, D. A. (2017). Allometric equations for integrating remote sensing imagery into forest monitoring programmes. Global Change Biology, 23, 177–190.
Kamel L, Tang N, Malbreil M, San Clemente H, Le Marquer M, Roux C, Frei Dit Frey N (2017) The Comparison of Expressed Candidate Secreted Proteins from Two Arbuscular Mycorrhizal Fungi Unravels Common and Specific Molecular Tools to Invade Different Host Plants. Front Plant Sci. 2017 Feb 7 ;8:124. doi: 10.3389/fpls.2017.00124. eCollection 2017
Kasmi, A., Hammami, M., Raoelison, E. G., Abderrabba, M., Bouajila, J., & Ducamp, C. (2017). Chemical Composition and Behavioral Effects of Five Plant Essential Oils on the Green Pea Aphid Acyrthosiphon pisum ( Harris ) (Homoptera: Aphididae). Chemistry & Biodiversity, 14(5), e1600464.
Katsanis, A., Magro, A., Ramon-Portugal, F., Kenis, M., & Babendreier, D. (2017). Chemical defences of native European coccinellid eggs against intraguild predation by the invasive Asian coccinellid, Harmonia axyridis (Pallas). BioControl, 62(3), 385–396.
Keymer A, Pimprikar P, Wewer V, Huber C, Brands M, Bucerius SL, Delaux PM, Klingl V, Röpenack-Lahaye EV, Wang TL, Eisenreich W, Dörmann P, Parniske M, Gutjahr C (2017) Lipid transfer from plants to arbuscular mycorrhizal fungi. Elife. pii: e29107. doi: 10.7554/eLife.29107
Khafif, M., Balague, C., Huard-Chauveau, C., Roby, D. (Auteur de correspondance) (2017). An essential role for the VASt domain of the Arabidopsis VAD1 protein in the regulation of defense and cell death in response to pathogens. Plos One, 12 (7), 1-18
Khamar, H., Civeyrel, L., Pélissier, C., Badr, D., El Oualidi, J., & Touhami-Ouazzani, A. (2017). Verbascum ifranensis (Scrophulariaceae), a new endemic species from Morocco. Phytotaxa, 295, 132–140
Klemmer A. and Loreau M. (2017) Breaking Through Ecosystem Boundaries. Bulletin of the Ecological Society of America. 98(2), 95-98.
Kluyver, T. A., Jones, G., Pujol, B., Bennett, C., Mockford, E. J., Charles, M., … Osborne, C. P. (2017). Unconscious selection drove seed enlargement in vegetable crops: unconscious selection on vegetable seed size. Evolution Letters, 1(2), 64–72
Kocher, A., de Thoisy, B., Catzeflis, F., Huguin, M., Valière, S., Zinger, L., … Murienne, J. (2017). Evaluation of short mitochondrial metabarcodes for the identification of Amazonian mammals. Methods in Ecology and Evolution, 8(10), 1276–1283.
Kocher, A., De Thoisy, B., Catzeflis, F., Valiere, S., Bañuls, A.-L., & Murienne, J. (2017). iDNA screening: disease vectors as vertebrate samplers. Molecular Ecology.
Kocher, A., Gantier, J.-C., Gaborit, P., Zinger, L., Holota, H., Valiere, S., … Murienne, J. (2017). Vector soup: high-throughput identification of Neotropical phlebotomine sand flies using metabarcoding. Molecular Ecology Resources
Kocher, A., Valière, S., Bañuls, A.-L., & Murienne, J. (2017). High-throughput sequencing of kDNA amplicons for the analysis of Leishmania minicircles and identification of Neotropical species. Parasitology, 1–8.
Kong, H., Chevalier, M., Laffaille, P., & Lek, S. (2017). Spatio-temporal variation of fish taxonomic composition in a South-East Asian flood-pulse system. PLOS ONE, 12(3), e0174582.
Kopf, R. K., Nimmo, D. G., Humphries, P., Baumgartner, L. J., Bode, M., Bond, N. R., … Olden, J. D. (2017). Confronting the risks of large-scale invasive species control. Nature Ecology & Evolution, 1(6), 0172
Kuczynski, L., Chevalier, M., Laffaille, P., Legrand, M., & Grenouillet, G. (2017). Indirect effect of temperature on fish population abundances through phenological changes. PLOS ONE, 12(4), e0175735
Kumar, R., Barman, Phukan, Kabyashree, Singh, Jha, G., Sonti, R. V., Genin, S., Ray (2017). Ralstonia solanacearum virulence in tomato seedlings inoculated by leaf clipping. Plant Pathology, 66 (5), 835-841.
Lafuite A.-S. and Loreau M. (2017) Time-delayed biodiversity feedbacks and the sustainability of social-ecological systems. Ecological Modelling. 351, 96–108.
Lafuite A.-S., de Mazancourt C. and Loreau M. (2017) Delayed behavioural shifts undermine the sustainability of social–ecological systems. Proceedings of the Royal Society B.
Laniau, J., Frioux, C., Nicolas, J., Baroukh, C., Cortes, M.-P., Got, J., Trottier, C., Eveillard, D., Siegel, A. (2017). Combining graph and flux-based structures to decipher phenotypic essential metabolites within metabolic networks. PeerJ, 5
Le Chevalier H., Calvez O., Martinez-Silvestre A., Picard D., Guérin S., Isselin-Nondedeu F., Ribéron A. and Trochet A. (2017) Marking techniques in the marbled newt (Triturus marmoratus): PIT-tag and tracking device implant protocols. Acta Herpetologica.
Le Signor, C., Aime, D., Bordat, A., Belghazi, M., Labas, V., Gouzy, J., Young, N. D., Prosperi, J.-M., Leprince, O., Thompson, R., Buitink, J., Burstin, J., Gallardo, K. (2017). Genome-wide association studies with proteomics data reveal genes important for synthesis, transport and packaging of globulins in legume seeds. New Phytologist, 214 (4), 1597-1613
Leclaire S., Jacob S., Greene L.K., Dubay G.R. and Drea C.M. (2017) Social odors covary with bacterial community in the anal secretions of wild meerkats. Scientific Reports. 7, 3240
Leclaire, S. (2017). Recognition of prey odor in wild meerkats. Chemoecology, 27(2), 85–90.
Leclaire, S., Bourret, V., & Bonadonna, F. (2017). Blue petrels recognize the odor of their egg. Journal of Experimental Biology, 220(17), 3022–3025.
Lecompte, E., Bouanani, M.-A., de Thoisy, B., & Crouau-Roy, B. (2017). How do rivers, geographic distance, and dispersal behavior influence genetic structure in two sympatric New World monkeys? American Journal of Primatology, 79(7), e22660.
Lefebvre, B. (2017). Arbuscular mycorrhiza: A new role for N-acetylglucosamine. Nature Plants, 3 (6). ,
Legrand D., Cote J., Fronhofer E., Holt R.D., Ronce O., Schtickzelle N., Travis J.M.J., Clobert J. (2017) Eco-evolutionary dynamics in fragmented landscapes. Ecography, 40:9-25.
Lema Asqui, S., Vercammen, D., Serrano, I., Valls, M., Rivas, S., Van Breusegem, F., Conlon, F. L., Dangl, J. L., Coll (2017). AtSERPIN1 is an inhibitor of the metacaspase AtMC1-mediated cell death and autocatalytic processing in planta. New Phytologist, 1-11.
Leroux S.J., Albert C.H., Lafuite A-S., Rayfield B., Wang S., Gravel D. (2017) Structural uncertainty in models projecting the consequences of habitat loss and fragmentation on biodiversity. Ecography. 40(1), 36-47.
Ligerot, Y., De Saint Germain, A., Waldie, T., Troadec, C., Citerne, S., Kadakia, N., Pillot, J.-P., Prigge, M., Aubert, G., Bendahmane, A., Leyser, O., Estelle, M., Debellé, F., Rameau, C. (2017). The pea branching RMS2 gene encodes the PsAFB4/5 auxin receptor and is involved in an auxin-strigolactone regulation loop. Plos Genetics, 13 (12).
Liu, H., Ye, S., Yang, X., Guo, C., Zhang, H., Fan, L., … Li, Z. (2017). Spatio-temporal variability of periphytic protozoa related to environment in the Niyang River, Tibet, China. Chinese Journal of Oceanology and Limnology, 35(3), 489–500.
Liu, Y. (Co-premier auteur), Wu, D. (Co-premier auteur), Liu, Q., Zhang, S. (Co-premier auteur), Tang, Y., Jiang, G., Li, S. (Co-premier auteur), Ding, W. (Co-premier auteur) (2017). The sequevar distribution of Ralstonia solanacearum in tobacco-growing zones of China is structured by elevation. European Journal of Plant Pathology, 147 (3), 541-551.
Liu, Y., Tang, Y., Qin, X., Yang, L., Jiang, G., Li, S., Ding, W. (2017). Genome Sequencing of Ralstonia solanacearum CQPS-1, a Phylotype I Strain Collected from a Highland Area with Continuous Cropping of Tobacco. Frontiers in Microbiology, 8.
lonjon, F., Lohou, D., Cazale, A.-C., Büttner, D., Gomes Ribeiro, B., Péanne, C., Genin, S., Vailleau, F. (2017). HpaB-Dependent Secretion of Type III Effectors in the Plant Pathogens Ralstonia solanacearum and Xanthomonas campestris pv. vesicatoria. Scientific Reports, 7 (1).
Lunghi E., Guillaume O., Blaimont P. and Manenti R. (2017) The first ecological study on the oldest allochthonous population of European cave salamanders (Hydromantes sp.) Amphibia-Reptilia. DOI:10.1163/15685381-00003137
Magro, A., Hill, M. C., Gomez, M.-C., & Hemptinne, J.-L. (2017). Is assessment of oviposition sites using conspecific larval cues a general mechanism in aphidophagous ladybirds (Coccinellidae)? Journal of Applied Entomology, 141(3), 235–240.
Mangin, B., Bonnafous, F., Blanchet, N., Boniface, M.-C., Bret-Mestries, E., Carrere, S., Cottret, L., Legrand, L., Marage, G., Pegot - Espagnet, P., Munos, S., Pouilly, N., Vear, F., Vincourt, P., Langlade, N. (2017). Genomic Prediction of Sunflower Hybrids Oil Content. Frontiers in Plant Science, 8, 1-12.
Mangin, B., Casadebaig, P., Cadic, E., Blanchet, N., Boniface, M.-C., Carrere, S., Gouzy, J., Legrand, L., Mayjonade, B., Pouilly, N., André, T., Coque, M., Piquemal, J., Laporte, M., Vincourt, P., Munos, S., Langlade, N. (2017). Genetic control of plasticity of oil yield for combined abiotic stresses using a joint approach of crop modeling and genome-wide association. Plant, Cell and Environment, 40 (10), 2276-2291
Mangin, B., Pouilly, N., Boniface, M.-C., Langlade, N., Vincourt, P., Vear, F., Munos, S. (2017). Molecular diversity of sunflower populations maintained as genetic resources is affected by multiplication processes and breeding for major traits. Theoretical and Applied Genetics, 130 (6), 1099–1112
Marchetti, M., Clerissi, C., Yousfi, Y., Gris, C., Bouchez, O., Rocha, E., Cruveiller, S., Jauneau, A., Capela, D., Masson-Boivin, C. (2017). Experimental evolution of rhizobia may lead to either extra- or intracellular symbiotic adaptation depending on the selection regime. Molecular Ecology, 26 (7), 1818-1831.
Maréchaux, I., & Chave, J. (2017). An individual-based forest model to jointly simulate carbon and tree diversity in Amazonia: description and applications. Ecological Monographs, 87(4), 632–664
Maréchaux, I., Bartlett, M. K., Iribar, A., Sack, L., & Chave, J. (2017). Stronger seasonal adjustment in leaf turgor loss point in lianas than trees in an Amazonian forest. Biology Letters, 13(1), 20160819
Maréchaux, I., Rodrigues, A. S. L., & Charpentier, A. (2017). The value of coarse species range maps to inform local biodiversity conservation in a global context. Ecography, 40(10), 1166–1176.
Martin, F., Uroz, S., Barker, D. (2017). Ancestral alliances: Plant mutualistic symbioses with fungi and bacteria. Science, 356 (6340), 1-9.
Massi, K. G., Bird, M., Marimon, B. S., Marimon, B. H., Nogueira, D. S., Oliveira, E. A., … Feldpausch, T. R. (2017). Does soil pyrogenic carbon determine plant functional traits in Amazon Basin forests? Plant Ecology, 218(9), 1047–1062.
Mayjonade, B. (Auteur de correspondance), Gouzy, J., Donnadieu, C., Pouilly, N., Marande, W., Callot, C., Langlade, N., Munos, S. (2017). Protocol For: Extraction of high-molecular-weight genomic DNA for long-read sequencing of single molecules. BioTechniques, 62 (1). , DOI: 10.2144/000114503
Meli P., Holl K.D., Rey-Benayas J.M., Jones H.J., Jones P.C., Montoya D. and Moreno-Mateos D. (2017) A global review of past land use, climate, and active vs. passive restoration effects on forest recovery. PLoS One. 12(2), e0171368.
Mensous, M., Van de Paer, C., Manzi, S., Bouchez, O., Baâli-Cherif, D., & Besnard, G. (2017). Diversity and evolution of plastomes in Saharan mimosoids: potential use for phylogenetic and population genetic studies. Tree Genetics & Genomes, 13(2).
Merkling, T., Blanchard, P., Chastel, O., Glauser, G., Vallat-Michel, A., Hatch, S. A., … Helfenstein, F. (2017). Reproductive effort and oxidative stress: effects of offspring sex and number on the physiological state of a long-lived bird. Functional Ecology, 31(6), 1201–1209
Minaya, M., Hackel, J., Namaganda, M., Brochmann, C., Vorontsova, M. S., Besnard, G., & Catalán, P. (2017). Contrasting dispersal histories of broad- and fine-leaved temperate Loliinae grasses: range expansion, founder events, and the roles of distance and barriers. Journal of Biogeography, 44(9), 1980–1993.
Moitinho-Silva, L. and 40 coauthors including Jose M. Montoya (2017) The sponge microbiome Project. Gigascience. 6: 1-7.
Montoya, J.M., Donohue, I. and Pimm, S.L. (2017) Planetary boundaries for biodiversity: implausible science, pernicious policies. Trends in Ecology and Evolution. (online).
Moreno-Mateos D., Barbier E.B., Jones P.C., Jones H.P., Aronson J., López-López J.A., McCrackin M.L., Meli P., Montoya D. and Rey-Benayas J.M. (2017) Anthropogenic ecosystem disturbance and the recovery debt. Nature Communications. 8, 14163.
Mouammine, A., Pages, S., Lanois Nouri, A., Gaudriault, S., Jubelin, G., Bonabaud, M., Cruveiller, S., Dubois, E., Roche, Legrand, L., Brillard, J., Givaudan, A. (2017). An antimicrobial peptide-resistant minor subpopulation of Photorhabdus luminescens is responsible for virulence. Scientific Reports, 7, 43670.
Moulherat S., Chaine A.S., Mangin A., Aubret F., Sinervo B. and Clobert J. (2017) The roles of plasticity versus dominance in maintaining polymorphism in mating strategies. Scientific Reports. 7: 15939.
Nadal M, Sawers R, Naseem S, Bassin B, Kulicke C, Sharman A, An G, An K, Ahern KR, Romag A, Brutnell TP, Gutjahr C, Geldner N, Roux C, Martinoia E, Konopka JB & Paszkowski U (2017) An N-acetylglucosamine transporter required for arbuscular mycorrhizal symbioses in rice and maize. Nature Plants (3). doi:10.1038/nplants.2017.73
Nguyen HC, Cao PB, San Clemente H, Ployet R, Mounet F, Ladouce N, Harvengt L, Marque C, Teulieres C (2017) Special trends in CBF and DREB2 groups in Eucalyptus gunnii vs Eucalyptus grandis suggest that CBF are master players in the trade-off between growth and stress resistance. Physiol Plant 159: 445-467
Nyqvist, M. J., Cucherousset, J., Gozlan, R. E., & Britton, J. R. (2017). Relationships between individual movement, trophic position and growth of juvenile pike ( Esox lucius). Ecology of Freshwater Fish.
Ochsner, A. M., Christen, M., Hemmerle, L., Peyraud, R., Christen, B., Vorholt, J. A. (Auteur de correspondance) (2017). Transposon Sequencing Uncovers an Essential Regulatory Function of Phosphoribulokinase for Methylotrophy. Current Biology, 27 (17), 2579-2588
Ormancey M, Thuleau P, Mazars C, Cotelle V. (2017) CDPKs and 14-3-3 Proteins: Emerging Duo in Signaling. Trends Plant Sci. 22(3):263-272
Osdaghi, E., Forero Serna, N., Bolot, S., Le Saux, M., Jacques, M. A., Portier, P., Carrere, S., Koebnik, R. (2017). High-Quality Draft Genome Sequence of Curtobacterium sp. Strain Ferrero . Genome Announcements, 5 (48), e01378-17.
Parejo Mora, D., Silva, N., Danchin, E., & Avilés Regodón, J. M. (2017). Kestrels rely on two different types of social information from conspecifics when choosing breeding habitats. Ecosistemas, 26(3), 39–47
Pasquaretta, C., Jeanson, R., Andalo, C., Chittka, L., & Lihoreau, M. (2017). Analysing plant-pollinator interactions with spatial movement networks: Network pollination. Ecological Entomology, 42, 4–17.
Pellissier L., Albouy C., Bascompte J., Farwig N., Graham C., Loreau M., Maglianesi-Sandoz M. A., Melian C., Pitteloud C., Roslin T., Rohr R., Saavedra S., Thuiller W., Woodward G., Zimmermann N. E. and Gravel D. (2017) Comparing species interaction networks along environmental gradients. Biological Reviews. (in press).
Petriacq, P., de Bont, L., Genestout, L., Hao, J. F., Laureau, C., Florez-Sarasa, I., Rzigui, T., Queval, G., Gilard, F., Mauve, c., Guerard, F., Sibold, M., Marion, J., Fresneau, C., Brown, S., Danon, A., Krieger-Liszkay, A., Berthomé, R., Ribas-Carbo, M., Tcherkez, G., Cornic, G., Pineau, B., Gakière, B., De Paepe, R. (2017). Photoperiod Affects the Phenotype of Mitochondrial Complex I Mutants. Plant Physiology, 173 (1), 434-455.
Peyraud, R., Denny, T., Genin, S. (2017). Exopolysaccharide Quantification for the Plant Pathogen Ralstonia solanacearum. Bio-Protocol, 7 (10).
Peyraud, R., Dubiella, U. R., Barbacci, A., Genin, S., Raffaele, S., Roby, D. (2017). Advances on plant-pathogen interactions from molecular toward systems biology perspectives. Plant Journal, 90 (4), 720-737.
Philippe H., de Vienne D.M.D, Ranwez V., Roure B., Baurain D. and Delsuc F. (2017) Pitfalls in supermatrix phylogenomics. European Journal of Taxonomy. 283, 1-25
Picheny, V., Casadebaig, P., Trepos, R., Faivre, R., Da Silva, D., Vincourt, P., Costes, E. (2017). Using numerical plant models and phenotypic correlation space to design achievable ideotypes. Plant, Cell and Environment, 40 (9), 1926-1939.
Pierart A, Dumat C, Maes AQ, Roux C, Sejalon-Delmas N (2018). Opportunities and risks of biofertilization for leek production in urban areas: Influence on both fungal diversity and human bioaccessibility of inorganic pollutants. Stoten, 624:1140-1151.
Pierart A, Dumat C, Maes AQ, Sejalon-Delmas N (2018). Influence of arbuscular mycorrhizal fungi on antimony phyto-uptake and compartmentation in vegetables cultivated in urban gardens. Chemosphere, 191:272-279.
Pineaux, M., & Turgeon, J. (2017). Behavioural Consistency in Female Resistance to Male Harassment in a Water Strider Species. Ethology, 123, 83–93.
Piou, V., Tabart, J., Hemptinne, J.-L., & Vétillard, A. (2017). Effect of pollen extract supplementation on the varroatosis tolerance of honey bee (Apis mellifera) larvae reared in vitro. Experimental and Applied Acarology
Ployet R, Soler M, Carocha V, Ladouce N, Alves A, Rodrigues JC, Harvengt L, Marque C, Teulières C, Grima-Pettenati J, Mounet F (2017) Long cold exposure induces transcriptional and biochemical remodelling of xylem secondary cell wall in Eucalyptus. Tree Physiol: 1-14
Pornon, A., Andalo, C., Burrus, M., & Escaravage, N. (2017). DNA metabarcoding data unveils invisible pollination networks. Scientific Reports, 7(1)
Prunier, J. G., Dubut, V., Chikhi, L., & Blanchet, S. (2017). Contribution of spatial heterogeneity in effective population sizes to the variance in pairwise measures of genetic differentiation. Methods in Ecology and Evolution, 8(12), 1866–1877
Pujol, B., Archambeau, J., Bontemps, A., Lascoste, M., Marin, S., & Meunier, A. (2017). Mountain landscape connectivity and subspecies appurtenance shape genetic differentiation in natural plant populations of the snapdragon (Antirrhinum majus L.). Botany Letters, 164(2), 111–119.
Raffard, A., Lecerf, A., Cote, J., Buoro, M., Lassus, R., & Cucherousset, J. (2017). The functional syndrome: linking individual trait variability to ecosystem functioning. Proceedings of the Royal Society B: Biological Sciences, 284(1868), 20171893.
Rancurel, C., Legrand, L., Danchin, E. (Auteur de correspondance) (2017). Alienness: rapid detection of candidate horizontal gene transfers across the tree of life. Gene, 8 (10)
Réjou-Méchain, M., Tanguy, A., Piponiot, C., Chave, J., & Hérault, B. (2017). Biomass : an R package for estimating above-ground biomass and its uncertainty in tropical forests. Methods in Ecology and Evolution, 8(9), 1163–1167.
Rey T, Bonhomme M, Chatterjee A, Gavrin A, Toulotte J, Yang W, André O, Jacquet C, Schornack S (2017) The Medicago truncatula GRAS protein RAD1 supports arbuscular mycorrhiza symbiosis and Phytophthora palmivora susceptibility. J. Exp. Bot. 68: 5871-5881
Rey T, Dumas B. (2016) Plenty is not plague: Streptomyces symbiosis with crops. Trends Plant Sci. 22:30-37
Rich MK, Courty PE, Roux C, & Reinhardt D (2017). Role of the GRAS transcription factor ATA/RAM1 in the transcriptional reprogramming of arbuscular mycorrhiza in Petunia hybrida. BMC genomics, 18(1), 589
Riepe, C., Fujitani, M., Cucherousset, J., Pagel, T., Buoro, M., Santoul, F., … Arlinghaus, R. (2017). What determines the behavioral intention of local-level fisheries managers to alter fish stocking practices in freshwater recreational fisheries of two European countries? Fisheries Research, 194, 173–187
Riofrío-Dillon G., Gegout J.-C. and Bertrand R. (2017) Eutrophication impacted temperatre forest vegetation recently. bioRxiv.
Rodríguez A., Burgon J.D., Lyra M., Irisarri I., Baurain D., Blaustein L., Göcmen B., Künzel S., Mable B., Nolte A.W., Veith M., Steinfartz S., Elmer K.R., Philippe H., Vences M. (2017) Inferring the shallow phylogeny of true salamanders (Salamandra) by multiple phylogenomic approaches. Molecular phylogenetics and evolution. 115, 16-26
Rosspopoff, O., Chelysheva, L., Saffar, J., Lecorgne, L., Gey, D., Caillieux, E., Colot, V., Roudier, F., Hilson, P., Berthomé, R., Da Costa, M., Rech, P. (2017). Direct conversion of root primordium into shoot meristem relies on timing of stem cell niche development. Development, 144 (7), 1187-1200.
Roux, F., Bartoli, C. (2017). Genome-wide association studies in plant pathosystems: toward an ecological genomics approach. Frontiers in Plant Science, 8
Roy, M., Pozzi, A. C., Gareil, R., Nagati, M., Manzi, S., Nouioui, I., … Gardes, M. (2017). Alder and the Golden Fleece: high diversity of Frankiaand ectomycorrhizal fungi revealed from Alnus glutinosasubsp. barbataroots close to a Tertiary and glacial refugium. PeerJ, 5, e3479.
Roy, M., Vasco-Palacios, A., Geml, J., Buyck, B., Delgat, L., Giachini, A., … Neves, M.-A. (2017). The (re)discovery of ectomycorrhizal symbioses in Neotropical ecosystems sketched in Florianópolis. New Phytologist, 214(3), 920–923
Saastamoinen M.,Bocedi G., Cote C., Legrand D., Guillaume F., Wheat C.W., Fronhofer E.A, Garcia C., Henry R., Husby A., Baguette M., Bonte D., Coulon A., Kokko H., Matthysen E., Niitepold K., Nonaka E., Stevens V.M., Travis J.M.J, Donohue K., Bullock J.M. and del Mar Delgado M. (2017) Genetics of dispersal. Biological Reviews. pp. 000–000. 1 doi: 10.1111/brv.12356
Sabo, J. L., Ruhi, A., Holtgrieve, G. W., Elliott, V., Arias, M. E., Ngor, P. B., … Nam, S. (2017). Designing river flows to improve food security futures in the Lower Mekong Basin. Science, 358(6368), eaao1053.
Salmona, J., Heller, R., Quéméré, E., & Chikhi, L. (2017). Climate change and human colonization triggered habitat loss and fragmentation in Madagascar. Molecular Ecology, 26(19), 5203–5222
Schaller, A., Stintzi, Rivas, S., Serrano, I., Chichkova, N. V., Vartapetian, Martínez, D., Guiamét, Sueldo, D. J., van der Hoorn, Ramírez, V., Vera, P. (2017). From structure to function - a family portrait of plant subtilases. New Phytologist, 1-15
Schwob, G., Roy, M., Manzi, S., Pommier, T., & Fernandez, M. P. (2017). Green alder Alnus viridis encroachment shapes microbial communities in subalpine soils and impacts its bacterial or fungal symbionts differently: Green alder encroachment. Environmental Microbiology, 19(8), 3235–3250
Scriba, M. F., Gasparini, J., Jacquin, L., Mettke-Hofmann, C., Rattenborg, N. C., & Roulin, A. (2017). The effect of food quality during growth on spatial memory consolidation in adult pigeons. The Journal of Experimental Biology, 220(4), 573–581.
Sentis, A., Binzer, A. & Boukal, D.S. (2017a) Temperature-size responses alter food chain persistence across environmental gradients. Ecology Letters 20, 852–862.
Sentis, A., Gémard, C., Jaugeon, B. & Boukal, D.S. (2017b) Predator diversity and environmental change modify the strengths of trophic and nontrophic interactions. Global Change Biology 23, 2629–2640.
Sentis, A., Hemptinne, J.-L. & Brodeur, J. (2017). Non-additive effects of simulated heat waves and predators on prey phenotype and transgenerational phenotypic plasticity. Global Change Biology 23, 4598–4608.
Sevin-Pujol, A., Sicard, M., Rosenberg, C., Auriac, M.-C., Lepage, A., Niebel, A., Gough, C., Bensmihen, S. (Auteur de correspondance) (2017). Development of a GAL4-VP1 6/UAS trans activation system for tissue specific expression in Medicago truncatula. Plos One, 12 (11).
Shanafelt D.W., Salau K. R. and Baggio J. A. (2017) Do-it-yourself networks: a novel method of generating weighted networks. Royal Society Publishing.
Sheriff, M. J., Bell, A., Boonstra, R., Dantzer, B., Lavergne, S. G., McGhee, K. E., … Love, O. P. (2017). Integrating Ecological and Evolutionary Context in the Study of Maternal Stress. Integrative and Comparative Biology, 57(3), 437–449
Silva, C., Besnard, G., Piot, A., Razanatsoa, J., Oliveira, R. P., & Vorontsova, M. S. (2017). Museomics resolve the systematics of an endangered grass lineage endemic to north-western Madagascar. Annals of Botany, 119(3), 339–351.
Simion P., Philippe H., Baurain D., Jager M., Richter D.J., Di Franco A., Roure B., Satoh N., Quéinnec E., Ereskovsky A., Lapébie P., Corre E., Delsuc F., King N., Wörheide G. and Manuel M. (2017) A large and consistent phylogenomic dataset supports sponges as the sister group to all other animals. Current Biology. 27 (7), 958-967
Singer M.C. (2017) Shifts in time and space interact as climate warms. PNAS. vol. 114 no. 49, 12848–12850
Soininen, E. M., Zinger, L., Gielly, L., Yoccoz, N. G., Henden, J.-A., & Ims, R. A. (2017). Not only mosses: lemming winter diets as described by DNA metabarcoding. Polar Biology, 40(10), 2097–2103
Soler M, Plasencia A, Larbat R, Pouzet C, Jauneau A, Rivas S, Pesquet E, Lapierre C, Truchet I, Grima-Pettenati J (2017) The Eucalyptus linker histone variant EgH1.3 cooperates with the transcription factor EgMYB1 to control lignin biosynthesis during wood formation. New Phytologist 213: 287-299
Soler, M., Plasencia, A., Larbat, R., Pouzet, C., Jauneau, A., Rivas, S., Pesquet, E., Lapierre, C., Truchet, I., Grima-Pettenati, J. (2017). The Eucalyptus linker histone variant EgH1.3 cooperates with the transcription factor EgMYB1 to control lignin biosynthesis during wood formation. New Phytologist, 213 (1), 287-299.
Sor, R., Boets, P., Chea, R., Goethals, P. L. M., & Lek, S. (2017). Spatial organization of macroinvertebrate assemblages in the Lower Mekong Basin. Limnologica - Ecology and Management of Inland Waters, 64, 20–30
Sor, R., Boets, P., Lek, S., & Goethals, P. (2017). Spatio-temporal co-occurrence of alien and native molluscs: a modelling approach using physical-chemical predictors. Aquatic Invasions, 12(2), 147–158.
Sor, R., Park, Y.-S., Boets, P., Goethals, P. L. M., & Lek, S. (2017). Effects of species prevalence on the performance of predictive models. Ecological Modelling, 354, 11–19.
Sotoodeh, A., Attar, F., & Civeyrel, L. (2017). Verbascum songaricum subsp. subdecurrens: a new record, typification and the true identity of V. aspinum as a new synonym of V. stachydiforme in the Flora of Iran. Kew Bulletin, 72(2).
Stas, S. M., Rutishauser, E., Chave, J., Anten, N. P. R., & Laumonier, Y. (2017). Estimating the aboveground biomass in an old secondary forest on limestone in the Moluccas, Indonesia: Comparing locally developed versus existing allometric models. Forest Ecology and Management, 389, 27–34
Sullivan, M. J. P., Talbot, J., Lewis, S. L., Phillips, O. L., Qie, L., Begne, S. K., … Zemagho, L. (2017). Diversity and carbon storage across the tropical forest biome. Scientific Reports, 7, 39102.
Susset, E. C., Hemptinne, J.-L., & Magro, A. (2017). Overwintering Sites Might not be Safe Haven for Hippodamia undecimnotata (Schneider) (Coleoptera: Coccinellidae). The Coleopterists Bulletin, 71(3), 556–564.
Susset, E. C., Magro, A., & Hemptinne, J.-L. (2017). Using species distribution models to locate animal aggregations: a case study with Hippodamia undecimnotata (Schneider) overwintering aggregation sites: Locating Hippodamia undecimnotata aggregation site. Ecological Entomology, 42(3), 345–354
Talaga, S., Leroy, C., Guidez, A., Dusfour, I., Girod, R., Dejean, A., & Murienne, J. (2017). DNA reference libraries of French Guianese mosquitoes for barcoding and metabarcoding. PLOS ONE, 12(6), e0176993
Tang, L., Jacquin, L., Lek, S., Liu, H., Li, Z., Liu, J., & Zhang, T. (2017). Differences in anti-predator behavior and survival rate between hatchery-reared and wild grass carp (Ctenopharyngodon idellus ). Annales de Limnologie - International Journal of Limnology, 53, 361–367.
Tedesco P.A., Beauchard O., Bigome R., Blanchet S., Buisson L., Conti L., Cornu J.F., Dias M.S., Grenouillet G., Hugueny B., Jézéquel C., Leprieur F., Brosse S. and Oberdorff (2017) A global database on freshwater fish species occurrence in drainage basins. Scientific Data. 4: 170141
Tedesco, P. A., Paradis, E., Lévêque, C., & Hugueny, B. (2017). Explaining global-scale diversification patterns in actinopterygian fishes. Journal of Biogeography, 44(4), 773–783
Tekwa E.W., Nguyen D., Loreau M. and Gonzalez A. (2017) Defector clustering is linked to cooperation in a pathogenic bacterium. Proceedings of the Royal Society B. 284: 20172001.
The RAINFOR collaboration, Phillips, O. L., & Brienen, R. J. W. (2017). Carbon uptake by mature Amazon forests has mitigated Amazon nations’ carbon emissions. Carbon Balance and Management, 12(1).
Thomas F., Jacqueline C., Tazzio T., Morgane H., Blanchet S., Loot G., Dawson E., MŽry F., Renaud F., Montagne J., Beckmann C., Biro P., Rodrigo H. and Ujvari B. (2017) The importance of cancer cell communities for animal evolutionary ecology. Nature Ecology & Evolution. 1: 1592-1595
Tredennick A.T., de Mazancourt C., Loreau M. and Adler P.B. (2017) Environmental responses, not species interactions, determine synchrony of dominant species in semiarid grasslands. Ecology. 98(4), 971–981.
Trochet A., Le Chevalier H., Calvez O., Barthe L., Isselin-Nondedeu F., Picard D., Debelgarric M., Pégourié N., Rocher R. and Ribéron A. (2017) Post-breeding movement correlated with morphology in the marbled newt in forest and agricultural lands: a comparative radio-tracking study. Herpetologica. 73(1):1-9
Tymen, B., Vincent, G., Courtois, E. A., Heurtebize, J., Dauzat, J., Marechaux, I., & Chave, J. (2017). Quantifying micro-environmental variation in tropical rainforest understory at landscape scale by combining airborne LiDAR scanning and a sensor network. Annals of Forest Science, 74(2).
Vacher, J.-P., Kok, P. J. R., Rodrigues, M. T., Lima, J. D., Lorenzini, A., Martinez, Q., … Fouquet, A. (2017). Cryptic diversity in Amazonian frogs: Integrative taxonomy of the genus Anomaloglossus (Amphibia: Anura: Aromobatidae) reveals a unique case of diversification within the Guiana Shield. Molecular Phylogenetics and Evolution, 112, 158–173.
Vallina S.M., Cermeno P., Dutkiewicz S., Loreau M., Montoya J.M. (2017) Phytoplankton functional diversity increases ecosystem productivity and stability. Ecological Modelling. 361, 184–196.
Valverde S., Piñero J., Corominas-Murtra B., Montoya J., Joppa L. and Solé R. (2017) The architecture of mutualistic networks as an evolutionary spandrel. Nature Ecology and Evolution.
Van de Paer, C., Bouchez, O., & Besnard, G. (2017). Prospects on the evolutionary mitogenomics of plants: a case study on the olive family (Oleaceae). Molecular Ecology Resources.
Veselý, L., Boukal, D.S., Buřič, M., Kozák, P., Kouba, A. & Sentis, A. (2017) Effects of prey density, temperature and predator diversity on nonconsumptive predator-driven mortality in a freshwater food web. Scientific Reports 7, 18075.
Villéger, S., Brosse, S., Mouchet, M., Mouillot, D., & Vanni, M. J. (2017). Functional ecology of fish: current approaches and future challenges. Aquatic Sciences, 79(4), 783–801.
Wang S., Loreau M., Arnoldi J.-F., Fang J., Abd Rahman A., Tao S. and de Mazancourt C. (2017) An invariability-area relationship sheds new light on the spatial scaling of ecological stability. Nature Communications. 8, 15211.
Wang, C., Lek, S., Lai, Z., & Tudesque, L. (2017). Morphology of Aulacoseira filaments as indicator of the aquatic environment in a large subtropical river: The Pearl River, China. Ecological Indicators, 81, 325–332
Werner Ribeiro, C., Baldacci-Cresp, F., Abad, P., Larousse, M., Benyamina, S. M., Lambert, A., Hopkins, J., Castella, C., Cazareth, J., Alloing, G., Boncompagni, É., Couturier, J., Mergaert, P., Gamas, P., Rouhier, N., Montrichard, F., Frendo, P. (2017). Regulation of Differentiation of Nitrogen-Fixing Bacteria by Microsymbiont Targeting of Plant Thioredoxin s1. Current Biology, 27 (2), 250-256
Winney, Isabel S., & Ihle, Malika. (2017). Transparent and credible practices under the microscope: a response to comments on Ihle et al. Behavioral Ecology, 28, 360–361.
Yang, L., Li, S. L., Qin, X. Y., Jiang, G., Chen, J. N., Li, B. D., Yao, X. Y., Liang, P. B., Zhang, Y., Ding, W. (2017). Exposure to Umbelliferone Reduces Ralstonia solanacearum Biofilm Formation, Transcription of Type III Secretion System Regulators and Effectors and Virulence on Tobacco. Frontiers in Microbiology, 8, 1-10
Young, R. C., Welcker, J., Barger, C. P., Hatch, S. A., Merkling, T., Kitaiskaia, E. V., … Kitaysky, A. S. (2017). Effects of developmental conditions on growth, stress and telomeres in black-legged kittiwake chicks. Molecular Ecology, 26(13), 3572–3584.
Z. Guo et al., Coexisting invasive gobies reveal no evidence for temporal and trophic niche differentiation in the sublittoral habitat of Lake Erhai, China, Ecology of Freshwater Fish, vol. 26, p. 42‑52, 2017.
Zanetti, M. E., Ripodas, C., Niebel, A. (Auteur de correspondance) (2017). Plant NF-Y transcription factors: Key players in plant-microbe interactions, root development and adaptation to stress. Biochimica et Biophysica Acta - Gene Regulatory Mechanisms , 1860 (5), 645-654
Závorka, L., Koeck, B., Cucherousset, J., Brijs, J., Näslund, J., Aldvén, D., … Johnsson, J. I. (2017). Co-existence with non-native brook trout breaks down the integration of phenotypic traits in brown trout parr. Functional Ecology, 31(8), 1582–1591.
Zhang R, Calixto CPG, Marquez Y, Venhuizen P, Tzioutziou NA, Guo W, Spensley M, Entizne JC, Lewandowska D, Ten Have S, Frei Dit Frey N, Hirt H, James AB, Nimmo HG, Barta A, Kalyna M, Brown JWS (2017) A high quality Arabidopsis transcriptome for accurate transcript-level analysis of alternative splicing. Nucleic Acid Res. 2017 May 19 ;45(9):5061-5073
Zhang Y., He N., Loreau M., Pan Q. and Han X. (2018) Scale dependence of the diversity-stability relationship in a temperate grassland. Journal of Ecology. (in press).
Zhang Y., Loreau M., He N., Zhang G. and Han X. (2017) Mowing exacerbates the loss of ecosystem stability under nitrogen enrichment in a temperate grassland. Functional Ecology. 31, 1637–1646.
Zhu X, Perez M, Aldon D, Galaud JP.(2017) Respective contribution of CML8 and CML9, two arabidopsis calmodulin-like proteins, to plant stress responses. Plant Signal Behav. 12(5):e1322246.
Zhu X, Robe E, Jomat L, Aldon D, Mazars C, Galaud JP.(2017) CML8, an Arabidopsis Calmodulin-Like Protein, Plays a Role in Pseudomonas syringae Plant Immunity. Plant Cell Physiol. 58(2):307-319
Zou, L., gastebois, A., Mathieu-Demazière, C., Sorroche, F., Masson-Boivin, C., Batut, J., Garnerone, A. M. (2017). Transcriptomic Insight in the Control of Legume Root Secondary Infection by the Sinorhizobium meliloti Transcriptional Regulator Clr. Frontiers in Microbiology, 8.
Zouine M, Maza E, Djari A, Lauvernier M, Frasse P, Smouni A, Pirrello J and Mondher Bouzayen M (2017). TomExpress, a unified tomato RNA-Seq platform for visualization of expression data, clustering and correlation networks. The Plant Journal doi: 10,1111/vox.12570.